NCBI submission: Difference between revisions
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== NCBI == | |||
[http://www.ncbi.nlm.nih.gov/Traces/assembly/assmbrowser.cgi?cmd=show&f=rfc&m=doc&s=rfc AA] | [http://www.ncbi.nlm.nih.gov/Traces/assembly/assmbrowser.cgi?cmd=show&f=rfc&m=doc&s=rfc AA] | ||
Compressed archive containing 2 files: ASSEMBLY.xml , MD5 | Compressed archive containing 2 files: ASSEMBLY.xml , MD5 | ||
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center: UMD | center: UMD | ||
description: University of Maryland | description: University of Maryland | ||
== Projects == | |||
'''Xoo''' | |||
bank2contig Xoo.bnk/ > Xoo.contig | |||
bank2fasta -b Xoo.bnk/ > Xoo.fasta (5240073 bp , 63.63 GC%) | |||
modContig --findcirc Xoo.contig circ.contig # not circular | |||
Revision as of 15:05, 15 August 2007
NCBI
Compressed archive containing 2 files: ASSEMBLY.xml , MD5 Accepted only by uploading to NCBI FTP server. server: ftp-private.ncbi.nlm.nih.gov login: umd_trc passwd: center: UMD description: University of Maryland
Projects
Xoo
bank2contig Xoo.bnk/ > Xoo.contig bank2fasta -b Xoo.bnk/ > Xoo.fasta (5240073 bp , 63.63 GC%) modContig --findcirc Xoo.contig circ.contig # not circular