Short read sequencing: Difference between revisions
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= Other = | = Other = | ||
* [http://www.1000genomes.org/page.php?page=home 1000 genomes] | |||
* [http://www.cbcb.umd.edu/~langmead/solexa_1000genomes.html Ben's 1] | * Ben's web sites | ||
# [http://www.cbcb.umd.edu/~langmead/solexa_1000genomes.html Ben's 1] | |||
# [http://www.cbcb.umd.edu/~langmead/solexa_format.html Ben's 2] | |||
* [ http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?cmd=table&f=run&m=data&s=run SRA] | |||
= Software = | = Software = | ||
Revision as of 22:48, 14 June 2008
Articles
06/13/2008
- The complete genome of an individual by massively parallel DNA sequencing (J.Watson's genome) Nature April 2008
- J.Watson's genome (supplementary info)
06/20/2008
Other
- Ben's web sites
Software
Under /fs/sz-user-supported/Linux-x86_64/bin/
Denovo assembly
- edena
- velvetg, velveth
Read mapping
- blat
- maq
- soap