Turkey: Difference between revisions
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= Data = | = Data = | ||
== Chicken == | |||
* http://www.ncbi.nlm.nih.gov/genome/guide/chicken | |||
* http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=Retrieve&dopt=Overview&list_uids=10808 | |||
* http://dec2007.archive.ensembl.org/info/downloads/ftp_site.html | |||
Stats: | |||
elem min q1 q2 q3 max mean n50 sum | |||
Chr1..28,32,MT,W,Z 32 1028 5102438 13986235 37400442 200994015 32246882 94230402 1031900246 | |||
other 25 2911 35775 105415 246252 63870806 2743207 63870806 68580195 | |||
all 57 1028 105415 2031799 18911934 200994015 19306674 94230402 1100480441 | |||
= Assembly2.0 = | |||
Stats: | |||
. elem min q1 q2 q3 max mean n50 sum | |||
ctg 145,663 64 1512 3433 8500 91891 6391 12594 930953352 | |||
scf 27,007 66 1354 1988 4793 9558742 37856 1538143 1022394764 | |||
Files: | |||
/fs/szattic-asmg4/turkey/Assembly2.0/ | /fs/szattic-asmg4/turkey/Assembly2.0/ | ||
Revision as of 01:10, 3 October 2009
Data
Chicken
- http://www.ncbi.nlm.nih.gov/genome/guide/chicken
- http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=Retrieve&dopt=Overview&list_uids=10808
- http://dec2007.archive.ensembl.org/info/downloads/ftp_site.html
Stats:
elem min q1 q2 q3 max mean n50 sum Chr1..28,32,MT,W,Z 32 1028 5102438 13986235 37400442 200994015 32246882 94230402 1031900246 other 25 2911 35775 105415 246252 63870806 2743207 63870806 68580195 all 57 1028 105415 2031799 18911934 200994015 19306674 94230402 1100480441
Assembly2.0
Stats:
. elem min q1 q2 q3 max mean n50 sum ctg 145,663 64 1512 3433 8500 91891 6391 12594 930953352 scf 27,007 66 1354 1988 4793 9558742 37856 1538143 1022394764
Files:
/fs/szattic-asmg4/turkey/Assembly2.0/