Cbcb:Pop-Lab:How-to: Difference between revisions
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==How-To repository== | ==How-To repository== | ||
[ | [[Getting Started in CBCB]] <br> | ||
[[Cbcb:Pop-Lab:AMOS-CVS How to use AMOS through CVS]] <br> | [[Cbcb:Pop-Lab:AMOS-CVS How to use AMOS through CVS]] <br> | ||
[[Cbcb:Pop-Lab:AMOScmp-SR How to use AMOScmp with short read data ]] <br> | [[Cbcb:Pop-Lab:AMOScmp-SR How to use AMOScmp with short read data ]] <br> | ||
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How do I use the antibiotic resistance database locally? <br> | How do I use the antibiotic resistance database locally? <br> | ||
How do I run jobs on the grid? <br> | How do I run jobs on the grid? <br> | ||
[[Cbcb:Pop-Lab:OTUs How do I create OTUs from 16S rRNA sequence data? | How do I create OTUs from 16S rRNA sequence data?]] <br> | |||
How do I compare metagenomic datasets through the metastats website?<br> | How do I compare metagenomic datasets through the metastats website?<br> | ||
How do I compare metagenomic datasets using R directly? <br> | How do I compare metagenomic datasets using R directly? <br> | ||
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How do I generate a scaffold graph starting from a 454 .ace file?<br> | How do I generate a scaffold graph starting from a 454 .ace file?<br> | ||
How do I draw a pretty picture of a scaffold stored in an AMOS bank?<br> | How do I draw a pretty picture of a scaffold stored in an AMOS bank?<br> | ||
[[Cbcb:Pop-Lab:How to use the partition software? | How do I use the partition software?]]<br> | |||
[[Cbcb:Pop-Lab:16S-pipeline 16S analysis pipeline (for Gates project)]] | |||
Latest revision as of 16:43, 20 January 2010
How-To repository
Getting Started in CBCB
Cbcb:Pop-Lab:AMOS-CVS How to use AMOS through CVS
Cbcb:Pop-Lab:AMOScmp-SR How to use AMOScmp with short read data
How do I annotate a genome at the CBCB?
How do I run the new Bambus?
How do I use the antibiotic resistance database?
How do I use the antibiotic resistance database locally?
How do I run jobs on the grid?
How do I create OTUs from 16S rRNA sequence data?
How do I compare metagenomic datasets through the metastats website?
How do I compare metagenomic datasets using R directly?
How do I find CRISPRs in a new genome?
Cbcb:Pop-Lab:SOMA How do I scaffold a genome using optical maps (both locally and through the web)
How do I generate graph information out of Minimus?
What tools are available for doing in silico finishing at the CBCB?
How do I generate a scaffold graph starting from a 454 .ace file?
How do I draw a pretty picture of a scaffold stored in an AMOS bank?
How do I use the partition software?
Cbcb:Pop-Lab:16S-pipeline 16S analysis pipeline (for Gates project)