Dpuiu articles

My articles

2010

• Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire Genome Biology
• New Assembly, Reannotation and Analysis of the Entamoeba histolytica Genome Reveal New Genomic Features and Protein Content Information PLoS

2009

• A whole-genome assembly of the domestic cow, Bos taurus Genome Biology
• Genome Sequence of the Wolbachia Endosymbiont of Culex quinquefasciatus JHB Journal of Bacteriology

2008

• Re-Assembly of the Genome of Francisella tularensis Subsp. holarctica OSU18 PLoS ONE
• Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads PLoS
• Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99 BMC Genomics

2007

• Genome of the Opportunistic Pathogen Streptococcus sanguinis JBacteriology

2004

• The genome of Cryptosporidium hominis Nature
• GeneX Va: VBC open source microarray database and analysis software. Biotcehniques
• Partitioning of Rearranged Ig Genes by Mutation Analysis Demonstrates D-D Fusion and V Gene Replacement in the Expressed Human Repertoire JImmunology
• CryptoDB: the Cryptosporidium genome resource NAR
• SUPERCONTIGS: A Contig Scaffolding Tool CSB

2002

• Self-Adapting Backfilling Scheduling for Parallel Systems ICPP

2001

• Intermediate Representation in Model Based Recognition Using Straight Line and Ellipsoidal Arc Primitives ICIAP

File location:

/nfshomes/dpuiu/Archives/JCVI/Documents/Personal/Career/

To read

• Evidence for symmetric chromosomal inversions around the replication origin in bacteria GenomeBiology 2000
• A simple, fast, and accurate method of phylogenomic inference GenomeBiology 2008
• The quest for orthologs: finding the corresponding gene across genomes