Dpuiu snp: Difference between revisions
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= Soap = | |||
* [http://soap.genomics.org.cn/soapaligner.html soap2] & [http://soap.genomics.org.cn/soapsnp.html soapsnp] | * [http://soap.genomics.org.cn/soapaligner.html soap2] & [http://soap.genomics.org.cn/soapsnp.html soapsnp] | ||
* Example: | |||
2bwt-builder genome.fasta | |||
soap2 –a frag_1.fastq -b frag_2.fastq -D genome.fasta.index -o frag.mated.soap2 -2 frag.single.soap -m 120 -x 240 | |||
soapsnp -i frag.mated.soap2.sorted -d genome.fasta -o genome.cns | |||