Burkholderia pseudomallei: Difference between revisions
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NCBI | NCBI | ||
[http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Burkholderia%20pseudomallei Genome Projects] | |||
21 Genome Projects, | |||
10 TIGR, 10 NMRC, 1 Sanger | |||
4 complete, 17 draft | |||
Sanger | |||
[http://www.sanger.ac.uk/Projects/B_pseudomallei/ Strain K96243 Genome Project] | |||
traces are not available | |||
NMRC | |||
no traces available on their site | |||
GenomeProjects: | NCBI GenomeProjects: | ||
1C Burkholderia pseudomallei 1106a [TIGR] Complete | |||
2 Burkholderia pseudomallei 1106b [TIGR] | 2 Burkholderia pseudomallei 1106b [TIGR] | ||
3 Burkholderia pseudomallei 112 [NMRC/Naval Medical Research Center] | 3 Burkholderia pseudomallei 112 [NMRC/Naval Medical Research Center] | ||
| Line 12: | Line 19: | ||
5 Burkholderia pseudomallei 1655 [TIGR] | 5 Burkholderia pseudomallei 1655 [TIGR] | ||
6 Burkholderia pseudomallei 1710a [TIGR] | 6 Burkholderia pseudomallei 1710a [TIGR] | ||
7C Burkholderia pseudomallei 1710b [TIGR] Complete | |||
8 Burkholderia pseudomallei 305 [TIGR/JGI/LANL] | 8 Burkholderia pseudomallei 305 [TIGR/JGI/LANL] | ||
9 Burkholderia pseudomallei 381 [NMRC/Naval Medical Research Center] | 9 Burkholderia pseudomallei 381 [NMRC/Naval Medical Research Center] | ||
10 Burkholderia pseudomallei 406e [TIGR] | 10 Burkholderia pseudomallei 406e [TIGR] | ||
11C Burkholderia pseudomallei 668 [TIGR] Complete | |||
12 Burkholderia pseudomallei 7894 [NMRC/Naval Medical Research Center] | 12 Burkholderia pseudomallei 7894 [NMRC/Naval Medical Research Center] | ||
13 Burkholderia pseudomallei 9 [NMRC/Naval Medical Research Center] | 13 Burkholderia pseudomallei 9 [NMRC/Naval Medical Research Center] | ||
| Line 23: | Line 30: | ||
16 Burkholderia pseudomallei BCC215 [NMRC/Naval Medical Research Center] | 16 Burkholderia pseudomallei BCC215 [NMRC/Naval Medical Research Center] | ||
17 Burkholderia pseudomallei DM98 [NMRC/Naval Medical Research Center] | 17 Burkholderia pseudomallei DM98 [NMRC/Naval Medical Research Center] | ||
18C Burkholderia pseudomallei K96243 [Sanger Institute] Complete ; seq not available for download | |||
19 Burkholderia pseudomallei NCTC 13177 [NMRC/Naval Medical Research Center] | 19 Burkholderia pseudomallei NCTC 13177 [NMRC/Naval Medical Research Center] | ||
20 Burkholderia pseudomallei Pasteur 52237 [TIGR] | 20 Burkholderia pseudomallei Pasteur 52237 [TIGR] | ||
21 Burkholderia pseudomallei S13 [TIGR] | 21 Burkholderia pseudomallei S13 [TIGR] | ||
NCBI AA: | |||
Assembly Name Submit. AssID TaxID TotalLength #Cgts #Traces Cov | |||
2 Burkholderia pseudomallei 1106b JCVI 2958 357347 7,213,434 113 77,893 8.5X | 1C Burkholderia pseudomallei 1106a TIGR 2387 357348 7,089,249 2 89,456 9.5X | ||
5 Burkholderia pseudomallei 1655 TIGR 657 331109 7,029,727 194 78,195 8.6X | 2 Burkholderia pseudomallei 1106b JCVI 2958 357347 7,213,434 113 77,893 8.5X | ||
6 Burkholderia pseudomallei 1710a JCVI 2959 320371 7,329,077 108 74,180 7.6X | 5 Burkholderia pseudomallei 1655 TIGR 657 331109 7,029,727 194 78,195 8.6X | ||
6 Burkholderia pseudomallei 1710a JCVI 2959 320371 7,329,077 108 74,180 7.6X | |||
10 Burkholderia pseudomallei 406e TIGR 719 360118 7,322,716 271 85,904 8.9X | 7C Burkholderia pseudomallei 1710b TIGR 798 320372 7,308,054 2 80,903 8.1X | ||
10 Burkholderia pseudomallei 406e TIGR 719 360118 7,322,716 271 85,904 8.9X | |||
20 Burkholderia pseudomallei Pasteur TIGR 717 331978 7,347,086 217 72,865 7.8X | 11C Burkholderia pseudomallei 668 TIGR 2413 320373 7,040,403 2 82,452 9.4X | ||
21 Burkholderia pseudomallei S13 TIGR 751 320374 7,388,856 169 91,531 9.5X | 20 Burkholderia pseudomallei Pasteur TIGR 717 331978 7,347,086 217 72,865 7.8X | ||
21 Burkholderia pseudomallei S13 TIGR 751 320374 7,388,856 169 91,531 9.5X | |||
File locations: | |||
/fs/szasmg2/Bacteria/Burkholderia_pseudomallei | |||
Latest revision as of 15:13, 28 November 2007
NCBI
Genome Projects 21 Genome Projects, 10 TIGR, 10 NMRC, 1 Sanger 4 complete, 17 draft
Sanger
Strain K96243 Genome Project traces are not available
NMRC
no traces available on their site
NCBI GenomeProjects:
1C Burkholderia pseudomallei 1106a [TIGR] Complete 2 Burkholderia pseudomallei 1106b [TIGR] 3 Burkholderia pseudomallei 112 [NMRC/Naval Medical Research Center] 4 Burkholderia pseudomallei 14 [NMRC/Naval Medical Research Center] 5 Burkholderia pseudomallei 1655 [TIGR] 6 Burkholderia pseudomallei 1710a [TIGR] 7C Burkholderia pseudomallei 1710b [TIGR] Complete 8 Burkholderia pseudomallei 305 [TIGR/JGI/LANL] 9 Burkholderia pseudomallei 381 [NMRC/Naval Medical Research Center] 10 Burkholderia pseudomallei 406e [TIGR] 11C Burkholderia pseudomallei 668 [TIGR] Complete 12 Burkholderia pseudomallei 7894 [NMRC/Naval Medical Research Center] 13 Burkholderia pseudomallei 9 [NMRC/Naval Medical Research Center] 14 Burkholderia pseudomallei 91 [NMRC/Naval Medical Research Center] 15 Burkholderia pseudomallei B7210 [NMRC/Naval Medical Research Center] 16 Burkholderia pseudomallei BCC215 [NMRC/Naval Medical Research Center] 17 Burkholderia pseudomallei DM98 [NMRC/Naval Medical Research Center] 18C Burkholderia pseudomallei K96243 [Sanger Institute] Complete ; seq not available for download 19 Burkholderia pseudomallei NCTC 13177 [NMRC/Naval Medical Research Center] 20 Burkholderia pseudomallei Pasteur 52237 [TIGR] 21 Burkholderia pseudomallei S13 [TIGR]
NCBI AA:
Assembly Name Submit. AssID TaxID TotalLength #Cgts #Traces Cov 1C Burkholderia pseudomallei 1106a TIGR 2387 357348 7,089,249 2 89,456 9.5X 2 Burkholderia pseudomallei 1106b JCVI 2958 357347 7,213,434 113 77,893 8.5X 5 Burkholderia pseudomallei 1655 TIGR 657 331109 7,029,727 194 78,195 8.6X 6 Burkholderia pseudomallei 1710a JCVI 2959 320371 7,329,077 108 74,180 7.6X 7C Burkholderia pseudomallei 1710b TIGR 798 320372 7,308,054 2 80,903 8.1X 10 Burkholderia pseudomallei 406e TIGR 719 360118 7,322,716 271 85,904 8.9X 11C Burkholderia pseudomallei 668 TIGR 2413 320373 7,040,403 2 82,452 9.4X 20 Burkholderia pseudomallei Pasteur TIGR 717 331978 7,347,086 217 72,865 7.8X 21 Burkholderia pseudomallei S13 TIGR 751 320374 7,388,856 169 91,531 9.5X
File locations:
/fs/szasmg2/Bacteria/Burkholderia_pseudomallei