Vector trimming: Difference between revisions
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= Sofware = | |||
* [http://sourceforge.net/projects/lucy/ | * [http://sourceforge.net/projects/lucy/ Lucy] | ||
= Data sets = | |||
== Bacillus anthracis == | |||
* No vector or clipping points | |||
57168 anc.bacillus_anthracis.001 | |||
* Files: | |||
/fs/szasmg3/dpuiu/VectorDiscovery/bacillus_anthracis | /fs/szasmg3/dpuiu/VectorDiscovery/bacillus_anthracis | ||
== Pseudomonas aeruginosa == | |||
* Some reads are missing vector trimming info | |||
491763 anc.pseudomonas_aeruginosa.001 # first 214715 miss CLIP_VECTOR_LEFT, CLIP_VECTOR_RIGHT; CLIP_LEFT=0 | |||
500002 anc.pseudomonas_aeruginosa.002 | |||
56960 anc.pseudomonas_aeruginosa.003 | |||
1048725 total | |||
* Files: | |||
/fs/szasmg3/dpuiu/VectorDiscovery/pseudomonas_aeruginosa | |||
Latest revision as of 19:55, 10 September 2009
Sofware
Data sets
Bacillus anthracis
- No vector or clipping points
57168 anc.bacillus_anthracis.001
- Files:
/fs/szasmg3/dpuiu/VectorDiscovery/bacillus_anthracis
Pseudomonas aeruginosa
- Some reads are missing vector trimming info
491763 anc.pseudomonas_aeruginosa.001 # first 214715 miss CLIP_VECTOR_LEFT, CLIP_VECTOR_RIGHT; CLIP_LEFT=0 500002 anc.pseudomonas_aeruginosa.002 56960 anc.pseudomonas_aeruginosa.003 1048725 total
- Files:
/fs/szasmg3/dpuiu/VectorDiscovery/pseudomonas_aeruginosa