Clostridium perfringens: Difference between revisions
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Strains: | Strains: | ||
1. A: not sequenced | 1. A: not sequenced | ||
2. ATCC 13124: JCVI; 54K reads, 1 contig | 2. ATCC 13124: JCVI; 54K reads, 1 contig ; finished; 3,256,683 bp ;28.38% GC | ||
3. B str. ATCC 3626: JCVI, 38K reads, 98 contigs | 3. B str. ATCC 3626: JCVI, 38K reads, 98 contigs | ||
4. C str. JGS1495: JCVI, 40K reads, 84 contigs | 4. C str. JGS1495: JCVI, 40K reads, 84 contigs | ||
| Line 21: | Line 21: | ||
10. 13: University of Tsukuba Japan, 52K reads (not available in NCBI TA), 2 contigs(chomosome+plasmid), phrap assembly (finished); | 10. 13: University of Tsukuba Japan, 52K reads (not available in NCBI TA), 2 contigs(chomosome+plasmid), phrap assembly (finished); | ||
password protected web site : http://kantaro2.grt.kyushu-u.ac.jp/microb/welch/ | password protected web site : http://kantaro2.grt.kyushu-u.ac.jp/microb/welch/ | ||
File locations: | |||
/fs/szasmg2/Bacteria/C_perfringens | |||
Revision as of 15:30, 10 October 2007
Data sources
NCBI:
Strains:
Strains:
1. A: not sequenced
2. ATCC 13124: JCVI; 54K reads, 1 contig ; finished; 3,256,683 bp ;28.38% GC
3. B str. ATCC 3626: JCVI, 38K reads, 98 contigs
4. C str. JGS1495: JCVI, 40K reads, 84 contigs
5. CPE str. F4969: JCVI, 37K reads, 74 contig
6. D: not sequenced
7. E str. JGS1987: JCVI, 38K reads, 101 contigs
8. NCTC 8239: JCVI, 38K reads, 55 contigs
9. SM101: JCVI+TIGR, 43K reads, 3 contigs (chromosome+2 plasmids) (finished)
10. 13: University of Tsukuba Japan, 52K reads (not available in NCBI TA), 2 contigs(chomosome+plasmid), phrap assembly (finished);
password protected web site : http://kantaro2.grt.kyushu-u.ac.jp/microb/welch/
File locations:
/fs/szasmg2/Bacteria/C_perfringens