Pseudomonas aeruginosa: Difference between revisions
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(→NCBI) |
(→CBCB) |
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| Line 14: | Line 14: | ||
Files: | Files: | ||
s_1_0001_prb.txt | s_1_0001_prb.txt | ||
s_1_sequence.txt | s_1_sequence.txt # contains seq & qual | ||
s_1_tag.txt | s_1_tag.txt | ||
s_7_0300_prb.txt | s_7_0300_prb.txt | ||
s_7_sequence.txt | s_7_sequence.txt # contains seq & qual | ||
s_7_tag.txt | s_7_tag.txt | ||
wc -l s_1_sequence.txt s_7_sequence.txt | wc -l s_1_sequence.txt s_7_sequence.txt | ||
| Line 24: | Line 24: | ||
4521907 s_7_sequence.txt | 4521907 s_7_sequence.txt | ||
8627900 total | 8627900 total | ||
grep -c N s_*seq | |||
s_1_sequence.seq:37933 | |||
s_7_sequence.seq:69669 | |||
Revision as of 16:28, 4 December 2007
Data
NCBI
Related strains
Pseudomonas aeruginosa PAO1 AE004091 complete Pseudomonas aeruginosa PA14 CP000438 complete
CBCB
File location:
/fs/szasmg2/Bacteria/Pseudomonas_aeruginosa/
Files:
s_1_0001_prb.txt s_1_sequence.txt # contains seq & qual s_1_tag.txt s_7_0300_prb.txt s_7_sequence.txt # contains seq & qual s_7_tag.txt wc -l s_1_sequence.txt s_7_sequence.txt 4105993 s_1_sequence.txt 4521907 s_7_sequence.txt 8627900 total
grep -c N s_*seq s_1_sequence.seq:37933 s_7_sequence.seq:69669