Strawberry: Difference between revisions
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= Assembly = | = Assembly = | ||
QC: | |||
TotalScaffolds=3254 | |||
TotalContigsInScaffolds=16511 | |||
TotalBasesInScaffolds=201898336 | |||
MeanBasesInScaffolds=62046 | |||
MaxBasesInScaffolds=5789689 | |||
MeanContigLength=12228 | |||
MinContigLength=91 | |||
MaxContigLength=215346 | |||
ReadsWithNoMate=17927899(91.61%) | |||
ReadsWithGoodMate=1282190(6.55%) | |||
ReadsWithBadShortMate=0(0.00%) | |||
ReadsWithBadLongMate=2756(0.01%) | |||
ReadsWithSameOrientMate=822(0.00%) | |||
ReadsWithOuttieMate=2274(0.01%) | |||
TotalUsableReads=19569767 | |||
AvgClearRange=273 | |||
ContigReads=15855471(81.02%) | |||
Files: | Files: | ||
/fs/szattic-asmg4/Strawberry/CA-20090722/9-terminator.0727 | /fs/szattic-asmg4/Strawberry/CA-20090722/9-terminator.0727 | ||
Latest revision as of 18:54, 23 November 2009
Assembly
QC:
TotalScaffolds=3254 TotalContigsInScaffolds=16511 TotalBasesInScaffolds=201898336 MeanBasesInScaffolds=62046 MaxBasesInScaffolds=5789689 MeanContigLength=12228 MinContigLength=91 MaxContigLength=215346 ReadsWithNoMate=17927899(91.61%) ReadsWithGoodMate=1282190(6.55%) ReadsWithBadShortMate=0(0.00%) ReadsWithBadLongMate=2756(0.01%) ReadsWithSameOrientMate=822(0.00%) ReadsWithOuttieMate=2274(0.01%) TotalUsableReads=19569767 AvgClearRange=273 ContigReads=15855471(81.02%)
Files:
/fs/szattic-asmg4/Strawberry/CA-20090722/9-terminator.0727