Francisella tularensis tularensis FSC033

Center: Broad

 Status: Assembly (15 contigs)

Data

Reference:

 NZ_AAYE00000000

Traces: from NCBI TA

Libraries:

 CENTER	PROJECT	STRAIN	LIB	TYPE	SIZE	STDEV	COUNT	Location
 WIBR           G907	033	G907A1	WGS	4,500	450	768	TA
 WIBR	        G907	033	G907A2	WGS	4,500	450	768	TA
 WIBR	        G907	033	G907A3	WGS	4,500	450	20,736	TA
 WIBR	        G907	033	G907A4	WGS	4,500	450	768	TA
 WIBR	        G919	033	454-410	454	.	.	278,235	TA
 StrainSubtotal                                                 301,275

Assembly

Locations:

 /fs/szasmg/Bacteria/F_tularensis_tularensis_FSC033/

2007_0807_AMOScmp

 Uses default trimming
 AMOScmp
 =>  13 scaff, 32 contigs

2007_0807_WGA

 Only WGS reads
 runCA-OBT.pl => new read clr, new library insert estimates
 => 12 scaff, 23 contigs

2007_0807_AMOScmp-OBT

 use  read clr, library insert estimates from 2007_0807_WGA 
 => 13 scaff, 23 contigs