Brugia malayi

Articles

Science 2007

Genome

• 6 chromosomes: 1-5, XY
• ~ 90M, 30% GC, 32% coding, 15% repeats

Genome Projects

• NCBI Genome project
• TIGR Genome project (TRS strain)

Traces

 Libraries:
   * 2K : bulk of the sequence @TIGR
   * 15-20 K @TIGR
   * 8,000 BAC clones @Children's Hospital Oakland Research Institute. 

• 9X coverage, 856K Sanger traces => 8,200 scaff & 29,808 ctg (avg. scaff=~10K & avg ctg=~3K)

• NCBI TA FTP

Summary:

  * all:          1,260,215 
  * TRACE_TYPE_CODE 
    * WGS:        1,258,277 
    * TRANSPOSON:     1,437 
    * PRIMER_WALK       501
  * CENTER NAME
    * TIGR:         856,624
    * JCVI          403,591
  * SEQ_LIB_ID:

Other sequences

Mitochondrion

• mitochondrion finished: 13,657 bp; 24% GC

Symbiont

• Wolbachia endosymbiont strain TRS from Brugia malayi strain wMel complete: 1,080,084 bp; 34%GC (New England Biolabs)
• Wolbachia endosymbiont strain wMel progress (TIGR)