Cbcb:Pop-Lab:Ted-Report

From Cbcb
Revision as of 18:25, 15 May 2009 by Tgibbons (talk | contribs) (Created page for my progress reports in the Pop Lab. Still don't know wiki syntax very well. Expect to heavily edit formatting.)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Summer 2009 Goals

  • Research traditional approaches taken to gene-level analysis of metagenomic data
  • Critically evaluate the traditional approaches in general and in the context of current Pop Lab projects
  • Identify portions of the analysis that can be automated
  • Develop scalable tools to do the automated analysis

May 15, 2009

  • Read VisANT paper and user manual. Determined VisANT will work for manual metabolic pathway analysis of even large scale data sets and can be automated by running in "Batch Mode".
  • Need to read about FastHMM
  • Still need to make "Welcome Wiki" for n00bs (read: new members)
Retrieved from "https://wiki.umiacs.umd.edu/cbcb/index.php?title=Cbcb:Pop-Lab:Ted-Report&oldid=5231"