Bumblebee

Data

• Location:

 /fs/szattic-asmg4/Bees/Bombus_impatiens

• There are 7 pairs of data files (paired ends) : lanes 1..3,5..8 (lane 4 wasn't used)

• Tasks to figure out:

1. Erroneous reads/bases, which we need to correct or discard
2. GC bias, so we can compute a-stats properly
3. Redundancy in the long paired ends, which are lane 1 and lane 2.

• Lane 1:

 3Kbp insert
 34,944,099 reads

• Lane 3:

 8Kbp insert
 32,540,640 reads