Assembly merge: Difference between revisions

From Cbcb
Jump to navigation Jump to search
No edit summary
No edit summary
Line 2: Line 2:


= No reference assembly =
= No reference assembly =
== One data set, multiple denovo assemblers ==


Example:  
Example:  
Line 7: Line 9:
   edena & velvet assemblers
   edena & velvet assemblers


== One data set, multiple denovo assemblers ==
== Multipls data sets, one(multiple) denovo assemblers ==


== Multipls data sets, multiple assemblers ==
Example:
  Solexa & 454 data
  velvet assemblers for each set


= One reference assembly =
= One reference assembly =


= Multiple reference assemblies =
= Multiple reference assemblies =

Revision as of 17:46, 27 March 2008

Cases:

No reference assembly

One data set, multiple denovo assemblers

Example:

 Solexa data
 edena & velvet assemblers

Multipls data sets, one(multiple) denovo assemblers

Example:

 Solexa & 454 data
 velvet assemblers for each set

One reference assembly

Multiple reference assemblies