Bacillus anthracis: Difference between revisions

From Cbcb
Jump to navigation Jump to search
Line 14: Line 14:
   Contigs  Traces  Status    Strain  
   Contigs  Traces  Status    Strain  
   0        96,532  Progress  A0039  
   0        96,532  Progress  A0039  
   62      67,600  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5765 Tsiankovskii-I] !!! in AA
   62      67,600  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5765 Tsiankovskii-I] AA
   1(+2)    101,379  Complete  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=403  Ames Ancestor (Ames 0581)] !!! in AA
   1(+2)    101,379  Complete  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=403  Ames Ancestor (Ames 0581)] AA
   42      86,181  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5239 A1055] !!! in AA
   42      86,181  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5239 A1055] AA
   1(+2)    83,552  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5278 A2012] ??? not in AA
   1(+2)    83,552  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5278 A2012]  
   1        125,879  Complete  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=299 Ames]  ??? not in AA
   1        125,879  Complete  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=299 Ames]  ??? not in AA
   49      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5241 Australia 94]  ??? NO TRACES  
   49      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5241 Australia 94]  ??? no TRACES  
   30      90,308  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5240 CNEVA-9066]  
   30      90,308  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5240 CNEVA-9066]  
   64      92,429  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5127 Kruger B] !!! in AA
   64      92,429  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5127 Kruger B] AA
   52      103,144  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5238 Vollum]  
   52      103,144  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5238 Vollum]  
   44      95,078  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5165 Western North America USA6153]
   44      95,078  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5165 Western North America USA6153]

Revision as of 14:25, 18 August 2008

Genome Projects

NIH Genome Projects

 Center          Complete     Assembly    Progress  Total
 TIGR/JCVI       2            8           1         11
 LANL            0            6           0         6
 DOE             1            0           0         1 
 NMRC            0            0           2         2
 Total           3            14          3         20

TIGR/JCVI Strains

 Contigs  Traces   Status    Strain 
 0        96,532   Progress  A0039 
 62       67,600   Assembly  Tsiankovskii-I AA
 1(+2)    101,379  Complete  Ames Ancestor (Ames 0581)  AA
 42       86,181   Assembly  A1055 AA
 1(+2)    83,552   Assembly  A2012 
 1        125,879  Complete  Ames  ??? not in AA
 49       0        Assembly  Australia 94   ??? no TRACES 
 30       90,308   Assembly  CNEVA-9066 
 64       92,429   Assembly  Kruger B AA
 52       103,144  Assembly  Vollum 
 44       95,078   Assembly  Western North America USA6153

LANL Strains

 Contigs  Traces   Status    Strain       
 60       0        Assembly  A0174
 60       0        Assembly  A0193
 68       0        Assembly  A0389
 46       0        Assembly  A0442
 57       0        Assembly  A0465
 63       0        Assembly  A0488

DOE Strains

 Contigs  Traces   Status    Strain
 1        147,665  Complete  Sterne

Naval Medical Research Center

 Contigs  Traces   Status    Strain
 0        0        Progress  34F2(NMRC)
 0        0        Progress  34F2 delta gerH