Bacillus anthracis: Difference between revisions

From Cbcb
Jump to navigation Jump to search
No edit summary
No edit summary
Line 12: Line 12:
== TIGR/JCVI Strains ==
== TIGR/JCVI Strains ==


   Contigs  Traces  Status    Date        Strain  
   Contigs  Traces  Status    Completed    Strain  
   0        96,532  Progress               A0039   
   0        96,532  Progress .            A0039   
   62      67,600  Assembly  2007/07/25  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5765 Tsiankovskii-I] AA
   62      67,600  Assembly  2007/07/25  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5765 Tsiankovskii-I] AA
   1(+2)    101,379  Complete   [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=403  Ames Ancestor (Ames 0581)]  AA ; Insignia
   1(+2)    101,379  Complete 2004/05/20  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=403  Ames Ancestor (Ames 0581)]  AA ; Insignia
   42      86,181  Assembly   [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5239 A1055] AA ; Insignia
   42      86,181  Assembly 2004/06/04  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5239 A1055] AA ; Insignia
   1(+2)    83,552  Assembly  2005/05/16   [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5278 A2012]  
   1(+2)    83,552  Assembly  2005/05/16 [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5278 A2012] ??? not in Insignia
   1        125,879  Complete  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=299 Ames]  ??? complete but not in AA ; Insignia
   1        125,879  Complete 2002/05/16 [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=299 Ames]  ??? complete but not in AA ; Insignia
   49      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5241 Australia 94]  ??? no TRACES ; Insignia
   49      0        Assembly 2004/06/07 [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5241 Australia 94]  ??? no TRACES ; Insignia
   30      90,308  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5240 CNEVA-9066] Insignia
   30      90,308  Assembly 2004/06/04 [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5240 CNEVA-9066] Insignia
   64      92,429  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5127 Kruger B] AA ; Insignia
   64      92,429  Assembly 2004/06/07 [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5127 Kruger B] AA ; Insignia
   52      103,144  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5238 Vollum] Insignia
   52      103,144  Assembly 2004/06/04 [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5238 Vollum] Insignia
   44      95,078  Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5165 Western North America USA6153] Insignia
   44      95,078  Assembly 2004/06/07 [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5165 Western North America USA6153] Insignia


== LANL Strains ==
== LANL Strains ==

Revision as of 14:52, 18 August 2008

Genome Projects

NIH Genome Projects

 Center          Complete     Assembly    Progress  Total
 TIGR/JCVI       2            8           1         11
 LANL            0            6           0         6
 DOE             1            0           0         1 
 NMRC            0            0           2         2
 Total           3            14          3         20

TIGR/JCVI Strains

 Contigs  Traces   Status    Completed    Strain 
 0        96,532   Progress  .            A0039  
 62       67,600   Assembly  2007/07/25  Tsiankovskii-I AA
 1(+2)    101,379  Complete  2004/05/20  Ames Ancestor (Ames 0581)  AA ; Insignia
 42       86,181   Assembly  2004/06/04  A1055 AA ; Insignia
 1(+2)    83,552   Assembly  2005/05/16  A2012 ??? not in Insignia
 1        125,879  Complete  2002/05/16  Ames  ??? complete but not in AA ; Insignia
 49       0        Assembly  2004/06/07  Australia 94   ??? no TRACES ; Insignia
 30       90,308   Assembly  2004/06/04  CNEVA-9066 Insignia
 64       92,429   Assembly  2004/06/07  Kruger B AA ; Insignia
 52       103,144  Assembly  2004/06/04  Vollum Insignia
 44       95,078   Assembly  2004/06/07  Western North America USA6153 Insignia

LANL Strains

 Contigs  Traces   Status    Strain       
 60       0        Assembly  A0174
 60       0        Assembly  A0193
 68       0        Assembly  A0389
 46       0        Assembly  A0442
 57       0        Assembly  A0465
 63       0        Assembly  A0488

DOE Strains

 Contigs  Traces   Status    Strain
 1        147,665  Complete  Sterne ??? complete but not in AA; Insignia

Naval Medical Research Center

 Contigs  Traces   Status    Strain
 0        0        Progress  34F2(NMRC)
 0        0        Progress  34F2 delta gerH