Bacillus anthracis: Difference between revisions

From Cbcb
Jump to navigation Jump to search
No edit summary
No edit summary
Line 14: Line 14:
   Contigs  Traces  Status    Completed    Strain  
   Contigs  Traces  Status    Completed    Strain  
   0        96,532  Progress  .            A0039   
   0        96,532  Progress  .            A0039   
   62      67,600  Assembly  2007/07/25  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5765 Tsiankovskii-I] AA
   62      67,600  Assembly  2007/07/25  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5765 Tsiankovskii-I] AA ; ??? possible update
   1(+2)    101,379  Complete  2004/05/20  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=403  Ames Ancestor (Ames 0581)]  AA ; Insignia
   1(+2)    101,379  Complete  2004/05/20  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=403  Ames Ancestor (Ames 0581)]  AA ; Insignia
   42      86,181  Assembly  2004/06/04  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5239 A1055] AA ; Insignia
   42      86,181  Assembly  2004/06/04  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5239 A1055] AA ; Insignia
Line 27: Line 27:
== LANL Strains ==
== LANL Strains ==


   Contigs  Traces  Status    Strain       
   Contigs  Traces  Status   Completed   Strain       
   60      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5943 A0174]
   60      0        Assembly  2008/04/08  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5943 A0174]
   60      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=27923 A0193]
   60      0        Assembly  2008/02/12  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5911 A0193]                            
   68      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=27917 A0389]
   68      0        Assembly  2008/03/24  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5935 A0389]
 
   46      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5910 A0442]
   46      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5910 A0442]
   57      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5932 A0465]
   57      0        Assembly  [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=5932 A0465]

Revision as of 14:57, 18 August 2008

Genome Projects

NIH Genome Projects

 Center          Complete     Assembly    Progress  Total
 TIGR/JCVI       2            8           1         11
 LANL            0            6           0         6
 DOE             1            0           0         1 
 NMRC            0            0           2         2
 Total           3            14          3         20

TIGR/JCVI Strains

 Contigs  Traces   Status    Completed    Strain 
 0        96,532   Progress  .            A0039  
 62       67,600   Assembly  2007/07/25  Tsiankovskii-I AA ; ??? possible update
 1(+2)    101,379  Complete  2004/05/20  Ames Ancestor (Ames 0581)  AA ; Insignia
 42       86,181   Assembly  2004/06/04  A1055 AA ; Insignia
 1(+2)    83,552   Assembly  2005/05/16  A2012 ??? not in Insignia
 1        125,879  Complete  2002/05/16  Ames  ??? complete but not in AA ; Insignia
 49       0        Assembly  2004/06/07  Australia 94   ??? no TRACES ; Insignia
 30       90,308   Assembly  2004/06/04  CNEVA-9066 Insignia
 64       92,429   Assembly  2004/06/07  Kruger B AA ; Insignia
 52       103,144  Assembly  2004/06/04  Vollum Insignia
 44       95,078   Assembly  2004/06/07  Western North America USA6153 Insignia

LANL Strains

 Contigs  Traces   Status    Completed    Strain       
 60       0        Assembly  2008/04/08   A0174
 60       0        Assembly  2008/02/12   A0193                              
 68       0        Assembly  2008/03/24   A0389
 46       0        Assembly  A0442
 57       0        Assembly  A0465
 63       0        Assembly  A0488

DOE Strains

 Contigs  Traces   Status    Strain
 1        147,665  Complete  Sterne ??? complete but not in AA; Insignia

Naval Medical Research Center

 Contigs  Traces   Status    Strain
 0        0        Progress  34F2(NMRC)
 0        0        Progress  34F2 delta gerH