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* 2 Bacillus athracis strains in progress at BCM; data available only by request | * 2 Bacillus athracis strains in progress at BCM; data available only by request | ||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Bacillus+anthracis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all][http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Bacillus+anthracis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete][http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Bacillus+anthracis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | Bacillus+anthracis | ||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Bacillus+anthracis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Bacillus+anthracis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Bacillus+anthracis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Clostridium+botulinum | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Clostridium+botulinum%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Clostridium+botulinum%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Clostridium+botulinum%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Francisella+tularensis | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Francisella+tularensis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all][http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Francisella+tularensis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Francisella+tularensis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Variola+major | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Variola+major%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Variola+major%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Variola+major%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Yersinia+pestis | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Yersinia+pestis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Yersinia+pestis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Yersinia+pestis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Brucella | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Brucella%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Brucella%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Brucella%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Burkholderia+mallei | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Burkholderia+mallei%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Burkholderia+mallei%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Burkholderia+mallei%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Burkholderia+pseudomallei | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Burkholderia+pseudomallei%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Burkholderia+pseudomallei%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Burkholderia+pseudomallei%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Chlamydia+psittaci | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Chlamydia+psittaci%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Chlamydia+psittaci%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Chlamydia+psittaci%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Clostridium+perfringens | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Clostridium+perfringens%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Clostridium+perfringens%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Clostridium+perfringens%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Coxiella+burnetii | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Coxiella+burnetii%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Coxiella+burnetii%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Coxiella+burnetii%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Cryptosporidium+parvum | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Cryptosporidium+parvum%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all][http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Cryptosporidium+parvum%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Cryptosporidium+parvum%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Escherichia+coli+O157:H7 | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Escherichia+coli+O157:H7%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Escherichia+coli+O157:H7%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Escherichia+coli+O157:H7%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Rickettsia+prowazekii | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Rickettsia+prowazekii%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Rickettsia+prowazekii%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Rickettsia+prowazekii%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Salmonella | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Salmonella%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Salmonella%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Salmonella%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Shigella | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Shigella%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Shigella%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Shigella%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Staphyloccocus+aureus | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Staphyloccocus+aureus%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Staphyloccocus+aureus%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Staphyloccocus+aureus%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Vibrio+cholerae | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Vibrio+cholerae%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Vibrio+cholerae%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Vibrio+cholerae%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Ricinus+communis | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Ricinus+communis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29 all] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Ricinus+communis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fcomplete%5BPROP%5D%29 complete] | |||
[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%28%22Ricinus+communis%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Fassembly%5BPROP%5D%29 assembly] | |||
Revision as of 15:02, 8 December 2008
Category Type Organism Disease #NCBI Genome Projects assembly(complete) ==================================================================================================================== A Bacteria Bacillus anthracis Anthrax 11(3) A Bacteria Clostridium botulinum Botulism 11(8) A Bacteria Francisella tularensis Tularemia 11(7) A Bacteria Yersinia pestis Plague 16(7) A Virus Arenaviruses(Lassa,Machupo...) Viral hemoragic fever 0 A Virus Bunyaviruses Viral hemoragic fever 0 A Virus Flaviruses Viral hemoragic fever 0 A Virus Filoviruses(Ebola,Marburg...) Viral hemoragic fever 0 A Virus Variola major Smallpox 0 B Bacteria Brucella Brucellosis 8(8) B Bacteria Burkholderia mallei Glanders 10(4) B Bacteria Burkholderia pseudomallei Melioidosis 21(4) B Bacteria Campylobacter jejuni ? 11(5) NIAID only B Bacteria Chlamydia psittaci Psittacosis 1(0) B Bacteria Clostridium perfringens Food poisoning(Epsilon toxin) 8(2) B Bacteria Coxiella burnetii Q fever 7(3) B Bacteria Escherichia coli O157:H7 Food poisoning 16(2) B Bacteria Listeria monocytogenes ? 20(2) NIAID only B Bacteria Rickettsia prowazekii Typhus fever 1(1) B Bacteria Salmonella Salmonellosis,Typhoid fever 30(10) B Bacteria Shigella Shigellosis,Dysenteria 10(7) B Bacteria Staphylococcus aureus Food poisoning(Enterotoxin B) 17(14) B Bacteria Vibrio cholerae Cholera 15(2) B Bacteria Yersinia enterocolitica ? 1(1) NIAID only B Plant Ricinus communis poisoning(Ricinus toxin) 1(0) B Protozoa Cryptosporidium parvum Cryptosporidiosis 1(1) B Virus Alphaviruses Viral encephalitis 0 C Virus Hantavirus Hemorrhagic fever 0 C Virus Nipah Viral encephalitis 0 ====================================================================================================================
Notes:
- Several new Clostridium botulinum strains ; E3 Alaska complete & not in Insignia
- Francisella philomiragia subsp. philomiragia ATCC 25017 project at DOE Joint Genome Institute ; complete; in Insignia
- Francisella tularensis B-SA project at Baylor College of Medicine; progress
- 2 Bacillus athracis strains in progress at BCM; data available only by request
Bacillus+anthracis all complete assembly
Clostridium+botulinum all complete assembly
Francisella+tularensis allcomplete assembly
Variola+major all complete assembly
Yersinia+pestis all complete assembly
Brucella all complete assembly
Burkholderia+mallei all complete assembly
Burkholderia+pseudomallei all complete assembly
Chlamydia+psittaci all complete assembly
Clostridium+perfringens all complete assembly
Coxiella+burnetii all complete assembly
Cryptosporidium+parvum allcomplete assembly
Escherichia+coli+O157:H7 all complete assembly
Rickettsia+prowazekii all complete assembly
Salmonella all complete assembly
Shigella all complete assembly
Staphyloccocus+aureus all complete assembly