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Line 4: |
Line 4: |
| * [http://www.ericbrc.org/portal/eric/ Enteropathogen Resource Integration Center] | | * [http://www.ericbrc.org/portal/eric/ Enteropathogen Resource Integration Center] |
| * [http://www.niaid.nih.gov/dmid/genomes/brc/ NIAID BRC] | | * [http://www.niaid.nih.gov/dmid/genomes/brc/ NIAID BRC] |
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| Category Type Organism Disease #NCBI Genome Projects assembly(complete)
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| ====================================================================================================================
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|
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| A Bacteria [[Bacillus_anthracis|Bacillus anthracis]] Anthrax [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Bacillus%20anthracis 11(3)]
| |
| A Bacteria [[Clostridium_botulinum|Clostridium botulinum]] Botulism [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Clostridium%20botulinum 11(8)]
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| A Bacteria [[Francisella_tularensis|Francisella tularensis]] Tularemia [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Francisella%20tularensis 11(7)]
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| A Bacteria [[Yersinia_pestis|Yersinia pestis]] Plague [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Yersinia%20pestis 16(7)]
| |
| A Virus Arenaviruses(Lassa,Machupo...) Viral hemoragic fever 0
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| A Virus Bunyaviruses Viral hemoragic fever 0
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| A Virus Flaviruses Viral hemoragic fever 0
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| A Virus Filoviruses(Ebola,Marburg...) Viral hemoragic fever 0
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| A Virus Variola major Smallpox 0
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|
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| B Bacteria Brucella Brucellosis [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Brucella 8(8)]
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| B Bacteria [[Burkholderia_mallei|Burkholderia mallei]] Glanders [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Burkholderia%20mallei 10(4)]
| |
| B Bacteria [[Burkholderia_pseudomallei|Burkholderia pseudomallei]] Melioidosis [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Burkholderia%pseudomallei 21(4)]
| |
| B Bacteria Campylobacter jejuni ? [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Campylobacter%20jejuni 11(5)] NIAID only
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| B Bacteria Chlamydia psittaci Psittacosis [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=12519 1(0)]
| |
| B Bacteria [[Clostridium_perfringens|Clostridium perfringens]] Food poisoning(Epsilon toxin) [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Clostridium%perfringens 8(2)]
| |
| B Bacteria Coxiella burnetii Q fever [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Coxiella%burnetii 7(3)]
| |
| B Bacteria Escherichia coli O157:H7 Food poisoning [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=259 16(2)]
| |
| B Bacteria Listeria monocytogenes ? [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Listeria%20monocytogenes 20(2)] NIAID only
| |
| B Bacteria Rickettsia prowazekii Typhus fever [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Rickettsia%prowazekii 1(1)]
| |
| B Bacteria [[Salmonella|Salmonella]] Salmonellosis,Typhoid fever [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Salmonella 30(10)]
| |
| B Bacteria Shigella Shigellosis,Dysenteria [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Shigella 10(7)]
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| B Bacteria Staphylococcus aureus Food poisoning(Enterotoxin B) [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Staphylococcus%20aureus 17(14)]
| |
| B Bacteria Vibrio cholerae Cholera [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Vibrio%cholerae 15(2)]
| |
| B Bacteria [[Yersinia_enterocolitica|Yersinia enterocolitica]] ? [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=Yersinia%20enterocolitica%20subsp.%20enterocolitica%208081 1(1)] NIAID only
| |
| B Plant Ricinus communis poisoning(Ricinus toxin) [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=16585 1(0)]
| |
| B Protozoa Cryptosporidium parvum Cryptosporidiosis [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=144 1(1)]
| |
| B Virus Alphaviruses Viral encephalitis 0
| |
|
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| C Virus Hantavirus Hemorrhagic fever 0
| |
| C Virus Nipah Viral encephalitis 0
| |
| ====================================================================================================================
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|
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| Notes:
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|
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| * Several new Clostridium botulinum strains ; E3 Alaska complete & not in Insignia
| |
| * Francisella philomiragia subsp. philomiragia ATCC 25017 project at DOE Joint Genome Institute ; complete; in Insignia
| |
| * Francisella tularensis B-SA project at Baylor College of Medicine; progress
| |
| * 2 Bacillus athracis strains in progress at BCM; data available only by request
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|
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|
| ---- | | ---- |
Line 224: |
Line 180: |
| [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Yersinia+enterocolitica%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Finprogress%5BPROP%5D%29 inprogress] | | [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%28%22Yersinia+enterocolitica%22%5BOrganism%5D+AND+pt%5Fdefault%5Bprop%5D%29+AND+seqstat%5Finprogress%5BPROP%5D%29 inprogress] |
| 0 | | 0 |
| | |
| | ---- |