Bioterrorism

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 Category        Type            Organism                        Disease                        #NCBI Genome Projects assembly(complete)          
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 A               Bacteria        Bacillus anthracis              Anthrax                        11(3)
 A               Bacteria        Clostridium botulinum           Botulism                       11(8)
 A               Bacteria        Francisella tularensis          Tularemia                      11(7)
 A               Bacteria        Yersinia pestis                 Plague                         16(7)
 A               Virus           Arenaviruses(Lassa,Machupo...)  Viral hemoragic fever          0
 A               Virus           Bunyaviruses                    Viral hemoragic fever          0
 A               Virus           Flaviruses                      Viral hemoragic fever          0
 A               Virus           Filoviruses(Ebola,Marburg...)   Viral hemoragic fever          0
 A               Virus           Variola major                   Smallpox                       0
 
 B               Bacteria        Brucella                        Brucellosis                    8(8)
 B               Bacteria        Burkholderia mallei             Glanders                       10(4)
 B               Bacteria        Burkholderia pseudomallei       Melioidosis                    21(4)
 B               Bacteria        Campylobacter jejuni            ?                              11(5) NIAID only
 B               Bacteria        Chlamydia psittaci              Psittacosis                    1(0)
 B               Bacteria        Clostridium perfringens         Food poisoning(Epsilon toxin)  8(2)
 B               Bacteria        Coxiella burnetii               Q fever                        7(3)
 B               Bacteria        Escherichia coli O157:H7        Food poisoning                 16(2)
 B               Bacteria        Listeria monocytogenes          ?                              20(2) NIAID only
 B               Bacteria        Rickettsia prowazekii           Typhus fever                   1(1)
 B               Bacteria        Salmonella                      Salmonellosis,Typhoid fever    30(10)
 B               Bacteria        Shigella                        Shigellosis,Dysenteria         10(7) 
 B               Bacteria        Staphylococcus aureus           Food poisoning(Enterotoxin B)  17(14)
 B               Bacteria        Vibrio cholerae                 Cholera                        15(2)  
 B               Bacteria        Yersinia enterocolitica         ?                              1(1) NIAID only
 B               Plant           Ricinus communis                poisoning(Ricinus toxin)       1(0)
 B               Protozoa        Cryptosporidium parvum          Cryptosporidiosis              1(1)
 B               Virus           Alphaviruses                    Viral encephalitis             0
 
 C               Virus           Hantavirus                      Hemorrhagic fever              0   
 C               Virus           Nipah                           Viral encephalitis             0
 ====================================================================================================================

Notes:

  • Several new Clostridium botulinum strains ; E3 Alaska complete & not in Insignia
  • Francisella philomiragia subsp. philomiragia ATCC 25017 project at DOE Joint Genome Institute ; complete; in Insignia
  • Francisella tularensis B-SA project at Baylor College of Medicine; progress
  • 2 Bacillus athracis strains in progress at BCM; data available only by request

Bacillus anthracis all 21 complete 3 assembly 14 inprogress 4

Clostridium botulinum all 16 complete 8 assembly 3 inprogress 5

Francisella tularensis all 21 complete 7 assembly 5 inprogress 8

Variola major all 0 complete 0 assembly 0 inprogress 0

Yersinia pestis all 21 complete 7 assembly 9 inprogress 5

Brucella all 10 complete 8 assembly 0 inprogress 0

Burkholderia mallei all 11complete 4 assembly 6 inprogress 0

Burkholderia pseudomallei all 22 complete 4 assembly 16 inprogress 2

Campylobacter jejuni all 13 complete 5 assembly 8 inprogress 0

Chlamydia psittaci all 2 complete 0 assembly 0 inprogress 2

Clostridium perfringens all 9 complete 3 assembly 6 inprogress 0

Coxiella burnetii all 7 complete 5 assembly 2 inprogress 0

Escherichia coli O157:H7 all 18 complete 2 assembly 13 inprogress 3

Listeria monocytogenes all 25 complete 2 assembly 20 inprogress 3

Rickettsia prowazekii all 2 complete 0 assembly 0 inprogress 0

Salmonella all 65 complete 15 assembly 23 inprogress 27

Shigella all 10 complete 7 assembly 0 inprogress 2

Staphyloccocus aureus all 0 complete 0 assembly 0 inprogress 0

Vibrio cholerae all 15 complete 2 assembly 13 inprogress 0

Yersinia enterocolitica all 0 complete 0 assembly 0 inprogress 0