Bos taurus redo: Difference between revisions

From Cbcb
Jump to navigation Jump to search
No edit summary
Line 3: Line 3:
* [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=bos%20taurus Genome Projects]
* [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genomeprj&cmd=search&term=bos%20taurus Genome Projects]
* [http://www.ncbi.nlm.nih.gov/Traces/trace.cgi?cmd=retrieve&size=0&val=SPECIES_CODE+%3D+%22BOS+TAURUS%22 TA search]  
* [http://www.ncbi.nlm.nih.gov/Traces/trace.cgi?cmd=retrieve&size=0&val=SPECIES_CODE+%3D+%22BOS+TAURUS%22 TA search]  
* ftp download counts


   SPECIES_CODE = "BOS TAURUS"                          37,788,710
   35629020        BCM            Baylor College of Medicine
    
   737900          NISC            NIH Intramural Sequencing Center
   CENTER_NAME = "BCM"                                 35,596,825
   652614          BCCAGSC        British Columbia Cancer Agency Genome Sciences Centre                          # TA query_tracedb CENTER_NAME = "BCCAGSC" => 652,510
   CENTER_NAME = "NISC"                                    737,900
   378871          MARC            USDA, ARS, US Meat Animal Research Center
   CENTER_NAME = "UOKNOR"                                   15,301     
   114753          UIUC            University of Illinois at Urbana-Champaign                                      # TA query_tracedb CENTER_NAME = "UIUC" => 106,368
   CENTER_NAME = "UIACBCB"                                  2,485
   107367          BARC            USDA, ARS, Beltsville Agricultural Research Center
   CENTER_NAME = "TIGR"                                    65,171
   65171          TIGR           The Institute for Genome Research
   CENTER_NAME = "MARC"                                    378,871
  53556          GSC            Genoscope
   CENTER_NAME = "BARC"                                    107,367
   43033          CENARGEN        Embrapa Genetic Resources and Biotechnology
   CENTER_NAME = "UIUC"                                    106,368
   18623          SC              The Sanger Center
   CENTER_NAME = "JCVI"                                     10,651
   15301          UOKNOR          University of Oklahoma Norman Campus, Advanced Center for Genome Technology
   CENTER_NAME = "GSC"                                      53,556
   10651          TIGR_JCVIJTC    The Institute for Genomic Research, Traces generated at JCVIJTC                # TA query_tracedb CENTER_NAME="JCVI"
   CENTER_NAME = "BCCAGSC"                                 652,510
   2485            UIACBCB        University of Iowa Center for Bioinformatics and Computation Biology (UIACBCB)
   CENTER_NAME = "CENARGEN"                                 43,033
   49              WUGSC          Washington University, Genome Sequencing Center                                # TA query_tracedb CENTER_NAME = "WUGSC" => 9
  CENTER_NAME = "SC"                                      18,623
   37829394        total          total                                                                          # TA query_tracedb SPECIES_CODE = "BOS TAURUS" => 37,788,710
  CENTER_NAME = "WUGSC"                                        9


 
   SPECIES_CODE = "BOS TAURUS" and CENTER_NAME = "BCM" and TRACE_TYPE_CODE = "WGS"      24,863,627  
   SPECIES_CODE = "BOS TAURUS" and CENTER_NAME = "BCM" and TRACE_TYPE_CODE = "WGS"      24,863,627  
   SPECIES_CODE = "BOS TAURUS" and CENTER_NAME = "BCM" and TRACE_TYPE_CODE = "SHOTGUN"  10,716,306  
   SPECIES_CODE = "BOS TAURUS" and CENTER_NAME = "BCM" and TRACE_TYPE_CODE = "SHOTGUN"  10,716,306  

Revision as of 17:53, 22 December 2008

NCBI

 35629020        BCM             Baylor College of Medicine
 737900          NISC            NIH Intramural Sequencing Center
 652614          BCCAGSC         British Columbia Cancer Agency Genome Sciences Centre                           # TA query_tracedb CENTER_NAME = "BCCAGSC" => 652,510 
 378871          MARC            USDA, ARS, US Meat Animal Research Center
 114753          UIUC            University of Illinois at Urbana-Champaign                                      # TA query_tracedb CENTER_NAME = "UIUC" => 106,368
 107367          BARC            USDA, ARS, Beltsville Agricultural Research Center
 65171           TIGR            The Institute for Genome Research
 53556           GSC             Genoscope
 43033           CENARGEN        Embrapa Genetic Resources and Biotechnology
 18623           SC              The Sanger Center
 15301           UOKNOR          University of Oklahoma Norman Campus, Advanced Center for Genome Technology
 10651           TIGR_JCVIJTC    The Institute for Genomic Research, Traces generated at JCVIJTC                 # TA query_tracedb CENTER_NAME="JCVI"
 2485            UIACBCB         University of Iowa Center for Bioinformatics and Computation Biology (UIACBCB)
 49              WUGSC           Washington University, Genome Sequencing Center                                 # TA query_tracedb CENTER_NAME = "WUGSC" => 9
 37829394        total           total                                                                           # TA query_tracedb SPECIES_CODE = "BOS TAURUS" => 37,788,710 



 SPECIES_CODE = "BOS TAURUS" and CENTER_NAME = "BCM" and TRACE_TYPE_CODE = "WGS"      24,863,627 
 SPECIES_CODE = "BOS TAURUS" and CENTER_NAME = "BCM" and TRACE_TYPE_CODE = "SHOTGUN"  10,716,306 
 SPECIES_CODE = "BOS TAURUS" and CENTER_NAME = "BCM" and TRACE_TYPE_CODE = "CLONEEND"     16,892

Data

Local Files: 

 /fs/szasmg3/bos_taurus/data/
Retrieved from "https://wiki.umiacs.umd.edu/cbcb/index.php?title=Bos_taurus_redo&oldid=4194"