Brugia malayi: Difference between revisions
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= Genome = | = Genome = | ||
* [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=10729 NCBI] | * [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=10729 NCBI] | ||
* 5 | * 6 chromosomes: 1-5, XY | ||
* ~ 90M, 30% GC, 32% coding, 15% repeats | * ~ 90M, 30% GC, 32% coding, 15% repeats | ||
* 9X coverage, 856K traces => 29,808 | * 9X coverage, 856K Sanger traces => 8,200 scaff & 29,808 ctg (avg. scaff=~10K & avg ctg=~3K) | ||
* finished | |||
* [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=16713 mitochondrion] finished: 13,657 bp; 24% GC | |||
* [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=Retrieve&dopt=Overview&list_uids=630 Wolbachia endosymbiont strain TRS from Brugia malayi strain wMel] complete: 1,080,084 bp; 34%GC (New England Biolabs) | |||
* Wolbachia endosymbiont strain wMel progress (TIGR) | |||
Revision as of 16:25, 18 August 2008
Articles
Genome
- NCBI
- 6 chromosomes: 1-5, XY
- ~ 90M, 30% GC, 32% coding, 15% repeats
- 9X coverage, 856K Sanger traces => 8,200 scaff & 29,808 ctg (avg. scaff=~10K & avg ctg=~3K)
- mitochondrion finished: 13,657 bp; 24% GC
- Wolbachia endosymbiont strain TRS from Brugia malayi strain wMel complete: 1,080,084 bp; 34%GC (New England Biolabs)
- Wolbachia endosymbiont strain wMel progress (TIGR)