Brugia malayi: Difference between revisions
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* TRANSPOSON: 1,437 | * TRANSPOSON: 1,437 | ||
* PRIMER_WALK 501 | * PRIMER_WALK 501 | ||
* CENTER NAME | |||
* TIGR: 856,624 | |||
* JCVI 403,591 | |||
* SEQ_LIB_ID: | |||
Revision as of 19:18, 18 August 2008
Articles
Genome
- NCBI Genome project
- TIGR Genome project (TRS strain)
Libraries: * 2K : bulk of the sequence @TIGR * 15-20 K @TIGR * 8,000 BAC clones @Children's Hospital Oakland Research Institute.
- 6 chromosomes: 1-5, XY
- ~ 90M, 30% GC, 32% coding, 15% repeats
- 9X coverage, 856K Sanger traces => 8,200 scaff & 29,808 ctg (avg. scaff=~10K & avg ctg=~3K)
- mitochondrion finished: 13,657 bp; 24% GC
- Wolbachia endosymbiont strain TRS from Brugia malayi strain wMel complete: 1,080,084 bp; 34%GC (New England Biolabs)
- Wolbachia endosymbiont strain wMel progress (TIGR)
- NCBI TA Bm traces (08/18/2008):
* all: 1,260,215
* TRACE_TYPE_CODE
* WGS: 1,258,277
* TRANSPOSON: 1,437
* PRIMER_WALK 501
* CENTER NAME
* TIGR: 856,624
* JCVI 403,591
* SEQ_LIB_ID: