Clostridium botulinum other strains: Difference between revisions

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* [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=search&term=Clostridium%20botulinum Genome Projects]
* [http://www.ncbi.nlm.nih.gov/sites/entrez?db=genome&cmd=search&term=Clostridium%20botulinum Genome Projects]


Strains:
Trace download:
 
* [ftp://ftp.ncbi.nih.gov/pub/TraceDB/ NCBI_TA_FTP]
* [ftp://ftp.ncbi.nih.gov/pub/TraceDB/ NCBI_TA_FTP]


Strains:
Genome projects:
   1. A str. ATCC 19397 [LANL/JCVI/DOE] complete  
   1. A str. ATCC 19397 [LANL/JCVI/DOE] complete  
   2*: A str. ATCC 3502 [Sanger] complete  
   2*: A str. ATCC 3502 [Sanger] complete  

Revision as of 17:42, 17 October 2007

Other than the Sanger sequenced Hall strain A (ATCC 3502)

Data sources

NCBI:

Trace download:

Genome projects:

 1. A str. ATCC 19397 [LANL/JCVI/DOE] complete 
 2*: A str. ATCC 3502 [Sanger] complete 
 3: A str. Hall [LANL/JCVI/DOE] complete 
 4: Bf [JCVI/MSC] 70 contigs ; in AA
 5: C str. Eklund [JCVI/MSC] 76 contigs  ; in AA
 6: F str. Langeland plasmid pCLI [LANL/JCVI/DOE] complete
 7: G [JCVI/MSC] 64 contigs  ; not in AA
 8: NCTC 2916 [JCVI/MSC] 70 contigs  ; in AA
 9: str. Iwanei E [JCVI/MSC] 66 contigs

File locations:

 /fs/szasmg2/Bacteria/C_botulinum/

Other links:

 * FDA
 "Clostridium botulinum is an anaerobic, Gram-positive, spore-forming rod that roduces a potent  neurotoxin. 
 The spores are heat-resistant and can survive in foods that are incorrectly or minimally processed. 
 Seven types (A, B, C, D, E, F and G) of botulism are recognized, based on the antigenic specificity of the toxin produced by each strain. 
 Types A, B, E and F cause human botulism. 
 Types C and D cause most cases of botulism in animals. 
 Animals most commonly affected are wild fowl and poultry, cattle, horses and some species of fish. 
 Although type G has been isolated from soil in Argentina, no outbreaks involving it have been recognized."