GA99-3548

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Revision as of 13:35, 17 August 2007 by Dpuiu (talk | contribs) (→‎Assembly)
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Center: Broad

 Status: Assembly (18 contigs)

Data

Reference:

 Name           Length %GC
 NZ_ABAH01000001.1 77907  33.26
 NZ_ABAH01000002.1 3200   35.62
 NZ_ABAH01000003.1 143439 32.80
 NZ_ABAH01000004.1 4000   35.33
 NZ_ABAH01000005.1 55000  33.33
 NZ_ABAH01000006.1 336    46.73  high GC%
 NZ_ABAH01000007.1 560    34.29
 NZ_ABAH01000008.1 623050 31.76
 NZ_ABAH01000009.1 18017  32.28
 NZ_ABAH01000010.1 238333 32.07
 NZ_ABAH01000011.1 312    44.23  high GC%
 NZ_ABAH01000012.1 466    44.21  high GC%
 NZ_ABAH01000013.1 293238 32.05
 NZ_ABAH01000014.1 171625 34.06
 NZ_ABAH01000015.1 1155   48.14  high GC%
 NZ_ABAH01000016.1 344    46.80  high GC%
 NZ_ABAH01000017.1 301    46.18  high GC%
 NZ_ABAH01000018.1 214208 32.15
 Total             1,845,491 bp     1,910,031 bp in U112(complete) => 64,540 bp in gaps

Traces: from NCBI TA

Libraries:

 CENTER  PROJECT   STRAIN     LIB     TYPE   SIZE STDEV   COUNT   Location
 WIBR    G909      GA99-3548  G909A2  WGS    4,500 450    768     TA
 WIBR    G909      GA99-3548  G909A4  WGS    4,500 450    768     TA
 WIBR    G909      GA99-3548  G909A3  WGS    4,500 450    23,040  TA
 WIBR    G921      GA99-3548  454-414 454    .     .      17,731  TA
 Total                                                    42,307

Assembly

Location: /fs/szasmg2/Bacteria/F_tularensis_novicida_GA99-3548

2007_0816_WGA