Dpuiu meeting notes
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09/22/08 (Pop lab)
- Stem cell lines
- Origin or replication
- GC skew non symmetric in mis-assembled genomes
- GFP genes
- CRispers -short (30bp) palindromic repeats; Koonin paper (Biology direct)
- CRispers - JGI paper
- CA VAR paper
- new consensus program
- optical maps for Yersinia genomes
09/30/09 (BRYAN WHITE; University of Illinois)
- Adventures in metagenomics of the gastrointestinal microbiome of food animals
- Metagenomics uses 16S rRNA: 1600bp long (eukariotes use 28S rRNA)
- New Koc=h's postulate
- OTU: Operational Taxonomic Unit (97% identity)
- commensal definition
- core/variable microbiome
- rumen project
- metagenomics.nmpdr.org
- Carl Woese