Dpuiu meeting notes: Difference between revisions
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= 09/22/08 (Pop lab)= | = 09/22/08 (Pop lab)= | ||
* Stem cell lines | * Stem cell lines | ||
* | * [http://en.wikipedia.org/wiki/DNA_replication Origin or replication] | ||
* GC skew non symmetric in mis-assembled genomes | * GC skew non symmetric in mis-assembled genomes | ||
* GFP genes | * GFP genes | ||
| Line 9: | Line 9: | ||
* new consensus program | * new consensus program | ||
* optical maps for Yersinia genomes | * optical maps for Yersinia genomes | ||
= 09/30/09 (BRYAN WHITE; University of Illinois) = | |||
* Adventures in metagenomics of the gastrointestinal microbiome of food animals | |||
* Metagenomics uses 16S rRNA: 1600bp long (eukariotes use 28S rRNA) | |||
* New Koc=h's postulate | |||
* OTU: Operational Taxonomic Unit (97% identity) | |||
* [http://www.thefreedictionary.com/commensal commensal definition] | |||
* core/variable microbiome | |||
* rumen project | |||
* [http://metagenomics.nmpdr.org/ metagenomics.nmpdr.org] | |||
* [http://en.wikipedia.org/wiki/Carl_Woese Carl Woese] | |||
Latest revision as of 15:16, 7 October 2008
09/22/08 (Pop lab)
- Stem cell lines
- Origin or replication
- GC skew non symmetric in mis-assembled genomes
- GFP genes
- CRispers -short (30bp) palindromic repeats; Koonin paper (Biology direct)
- CRispers - JGI paper
- CA VAR paper
- new consensus program
- optical maps for Yersinia genomes
09/30/09 (BRYAN WHITE; University of Illinois)
- Adventures in metagenomics of the gastrointestinal microbiome of food animals
- Metagenomics uses 16S rRNA: 1600bp long (eukariotes use 28S rRNA)
- New Koc=h's postulate
- OTU: Operational Taxonomic Unit (97% identity)
- commensal definition
- core/variable microbiome
- rumen project
- metagenomics.nmpdr.org
- Carl Woese