Cbcb:Pop-Lab:Software
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Software developed by members of our group
AMOS - open-source assembly package
Bambus - hierachical genome scaffolder
Figaro - sequence trimmer that does not require knowledge about the vector sequence
MetaAmos - a metagenomic assembly pipeline for AMOS
MetaStats - statistical methods for comparing metagenomic samples
On-Soma - scaffolder for optical mapping data
ARDB - antibiotic resistance database
Bowtie - ultrafast and memory-efficient short read aligner
Prokaryotic annotation pipeline
Comparative annotation viewer
Partition