User:Dpuiu

Daniela Puiu's page

NCBI:

• NCBI
• AA
• BLAST
• Microbial Genomes
• SRA
• SRA FTP
• TA
• TA FTP

Other links:

• Baylor
• EMBL
• EMBOSS
• JGI Microbial Genomes
• Sanger
• Sanger Microbial Genomes
• CBCB NCBI complete genomes: /fs/szdata//ncbi/genomes/Bacteria/ (*.fna)

Projects:

DHS genomes

• Bioterrorism
• Burkholderia mallei
• Burkholderia pseudomallei
• Clostridium botulinum (Hall strain A str. ATCC 3502)
• Clostridium botulinum (other)
• Clostridium perfringens
• Cryptosporidium hominis (test)
• Francisella tularensis
• Salmonella (WUSTL)
• Salmonella (other)
• Yersinia enterocolitica
• Yersinia pestis

Other genomes

• Coffee BACs
• Culex pipiens wolbachia symbiont
• Culex pipiens wolbachia mitochondrion
• Pseudomonas syringae plant bacteria, not a catergory A/B/C Pathogen
• Xanthomonas oryzae

Other

• NCBI submission
• Sequence manipulation
• Trace/Assembly formatting