Cbcb:Pop-Lab

Important pages

• Group members Cbcb:Pop-Lab:Members
• Blog: Genomes.blogspot.com
• How-tos: Cbcb:Pop-Lab:How-to - List of documentation on how to perform certain analyses, use different software, etc.
• Software developed by us: Cbcb:Pop-Lab:Software
• Metagenomics papers: Cbcb:Pop-Lab:Papers
• TODO items (please volunteer to take some of these on): Cbcb:Pop-Lab:TODO
• Grand Challenges: Cbcb:Pop-Lab:Challenges - research challenges

Tutorials/Documenation

BWT 2011 (Bioinformatics Whirwind Tour 2011) Format: 1 hour lectures, informal, theory + tools. June 27th - July 1st

• Intro to NGS Genome Assembly (Sergey & Todd, Monday @ 12:30pm)
• Intro to Statistics (Joe, Tuesday @ noon )
• Intro to Sequence Alignment (Mohammad, Wednesday @ 4pm)
• Intro to Gene/motif/pattern finding (Dan & Bo, Thursday @ 1:30pm)
• Intro to Clustering (Irina, Friday @ )

Meetings/seminars

• Group meeting: every Monday from 2:30pm in corner conference room (3120 C)
• CBCB seminar: Thursdays 2-3pm during the semester in main conference room
• Summer Reading Group 2009 (Computational Metabolic Pathway Analysis): Fridays from 2ish-5ish in 3120C in the SE corner of the Bioscience Research Building (BSB) from June 5-August 28

Progress Reports

• Ben
• Chris
• James
• Serge
• Bo
• Dan
• Mohammad
• Ted

Pop Lab Presentations

• Xanthomonas Crispr Slides (openoffice format)
• Listeria Monocytogenes Slides (powerpoint)
• Metagenome pipelines overview Presentation(pdf)