User:Dpuiu: Difference between revisions
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* [[Metagenoms|Metagenomics]] | * [[Metagenoms|Metagenomics]] | ||
* [[NCBI_submission|NCBI submission]] | * [[NCBI_submission|NCBI submission]] | ||
* [[Repeat_search|Repeat search]] | |||
* [[Trace_formatting|Sequence manipulation]] | * [[Trace_formatting|Sequence manipulation]] | ||
Revision as of 19:26, 4 November 2008
Daniela Puiu's page
Bookmarks
NCBI_submission wPip Definitions Perl Pop group meeting
NCBI
- NCBI ; AA ; BLAST ; Microbial_Genomes ; SRA SRA_FTP ; TA ; TA_FTP ; Genomes_FTP ; Bacterial Genomes FTP ; Taxonomy CommonTree
Links
- Baylor
- EMBL
- EMBOSS
- Homo Sapiens Genome Projects
- JGI Microbial Genomes
- JGI Genomes Online (GOLD)
- JGI Integrated Microbial Genomes (IMG)
- Sanger
- Sanger Microbial Genomes
- CBCB NCBI complete genomes: /fs/szdata//ncbi/genomes/Bacteria/ (*.fna)
Projects
DHS genomes
- Bioterrorism
- Bacillus anthracis
- Burkholderia mallei
- Burkholderia pseudomallei
- Clostridium botulinum (Hall strain A str. ATCC 3502) ; uploaded to Insignia
- Clostridium botulinum (other) ; some uploaded to Insignia
- Clostridium perfringens ; some uploaded to Insignia
- Cryptosporidium hominis (test)
- Francisella tularensis OSU18 in Insignia
- Francisella tularensis some uploaded to Insignia
- Salmonella (Washington Univ in St Louis)
- Salmonella (other)
- Yersinia enterocolitica
- Yersinia pestis
Other genomes
- Brugia malayi
- Coffee BACs
- Culex pipiens wolbachia symbiont
- Culex pipiens wolbachia mitochondrion
- Homo sapiens
- Pseudomonas aeruginosa
- Pseudomonas syringae
- Sea urchin
- Xanthomonas oryzae
Other
- Definitions
- Meeting notes
- My articles
- Perl ; C ; Linux
- Pop group meeting (Monday 's 3pm)
- Short read sequencing (Friday's 3pm)